Nbi_g28135


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28135

Target Alias Description ECC score Gene Family Method Actions
Adi_g003802 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004440 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058786 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066608 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g096938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099272 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g115114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18197 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05139 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05696 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05758 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54924 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20531 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23786 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28235 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28526 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68927 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28263.t1 CRR22, Aspi01Gene28263 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0144.g051584 No alias not classified & original description: CDS=1-1965 0.04 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.03 OrthoFinder output from all 47 species
Cba_g56780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G053600.1 Ceric.01G053600 not classified & original description: pacid=50592089... 0.03 OrthoFinder output from all 47 species
Ceric.34G039200.1 Ceric.34G039200 not classified & original description: pacid=50623691... 0.03 OrthoFinder output from all 47 species
Dac_g14062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g31126 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35356 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07693 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16811 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17265 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19078 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17642 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17712 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18216 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013023001 No alias Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.03 OrthoFinder output from all 47 species
Len_g12162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15292 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_184088g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Msp_g01336 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16027 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43122 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46650 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63651 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03488 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12889 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12890 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g14861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16145 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g22848 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30641 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33734 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08728 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54649 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003060 No alias not classified & original description: CDS=1-2058 0.03 OrthoFinder output from all 47 species
Sam_g16066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo442088 CRR22 Pentatricopeptide repeat-containing protein At2g33760... 0.02 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g12610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20273 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41043 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.02 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 732 756
IPR002885 Pentatricopeptide_repeat 825 856
IPR002885 Pentatricopeptide_repeat 554 600
IPR002885 Pentatricopeptide_repeat 451 499
IPR002885 Pentatricopeptide_repeat 145 192
IPR002885 Pentatricopeptide_repeat 758 806
IPR002885 Pentatricopeptide_repeat 656 702
IPR002885 Pentatricopeptide_repeat 349 396
IPR002885 Pentatricopeptide_repeat 247 294
No external refs found!