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  5. Nbi_g28757

Nbi_g28757 (B5 #5, CB5LP, ATCB5LP)


Aliases : B5 #5, CB5LP, ATCB5LP

Description : not classified & original description: none


Gene families : OG0000285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28757
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G60660 B5 #5, CB5LP, ATCB5LP cytochrome B5-like protein 0.02 OrthoFinder output from all 47 species
AT5G53560 CB5-E, ATCB5-E,... cytochrome B5 isoform E 0.02 OrthoFinder output from all 47 species
Adi_g020808 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Adi_g127395 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Als_g43317 B5 #3, CB5-D,... electron shuttle component *(Cyt-b5) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Als_g44478 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Als_g61326 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Cba_g32846 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000203.15 CB5-E, ATCB5-E,... Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
Cre16.g659350 B5 #3, CB5-D,... Cell wall.cutin and suberin.cuticular lipid... 0.01 OrthoFinder output from all 47 species
Dcu_g03462 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Gb_19092 B5 #4, ATCB5-B, CB5-B component Cyt-b5 of CER1-CER3 alkane-forming complex 0.03 OrthoFinder output from all 47 species
LOC_Os02g43360.1 CB5-E, ATCB5-E,... component Cyt-b5 of CER1-CER3 alkane-forming complex 0.02 OrthoFinder output from all 47 species
LOC_Os08g29669.1 B5 #5, CB5LP,... Cytochrome B5-like protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g37420.1 CB5-E, ATCB5-E,... component Cyt-b5 of CER1-CER3 alkane-forming complex 0.02 OrthoFinder output from all 47 species
Msp_g10033 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Pp3c21_6830V3.1 B5 #3, CB5-D,... cytochrome B5 isoform D 0.01 OrthoFinder output from all 47 species
Sam_g06571 No alias electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Solyc01g096270.3.1 CB5-E, ATCB5-E,... component Cyt-b5 of CER1-CER3 alkane-forming complex 0.03 OrthoFinder output from all 47 species
Zm00001e004353_P001 CB5-E, ATCB5-E,... component Cyt-b5 of CER1-CER3 alkane-forming complex 0.02 OrthoFinder output from all 47 species
Zm00001e012531_P001 CB5-E, ATCB5-E,... component Cyt-b5 of CER1-CER3 alkane-forming complex 0.02 OrthoFinder output from all 47 species
Zm00001e018510_P001 B5 #4, ATCB5-B,... component Cyt-b5 of CER1-CER3 alkane-forming complex 0.03 OrthoFinder output from all 47 species
Zm00001e028259_P002 B5 #4, ATCB5-B,... component Cyt-b5 of CER1-CER3 alkane-forming complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001199 Cyt_B5-like_heme/steroid-bd 106 176
No external refs found!