1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g28765

Nbi_g28765 (CML43)


Aliases : CML43

Description : calcium sensor *(CML) & original description: none


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28765
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00316p00014990 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML44 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s04023p00007260 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g03447 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10817 TCH3, ATCAL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10823 CML43 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27813 AGD11 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20635 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g60123 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06369.t1 Aspi01Gene06369 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11697.t1 CML42, Aspi01Gene11697 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34640.t1 CML42, Aspi01Gene34640 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34646.t1 CML42, Aspi01Gene34646 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34663.t1 CML42, Aspi01Gene34663 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34969.t1 UNE14, Aspi01Gene34969 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57523.t1 CML43, Aspi01Gene57523 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57526.t1 CML43, Aspi01Gene57526 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64179.t1 CML43, Aspi01Gene64179 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0173.g055801 No alias not classified & original description: CDS=1-912 0.05 OrthoFinder output from all 47 species
Cba_g09588 CML42 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G031000.1 CML43, Ceric.04G031000 calcium sensor *(CML) & original description:... 0.09 OrthoFinder output from all 47 species
Ceric.04G108800.1 CML43, Ceric.04G108800 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G008800.1 CML42, Ceric.35G008800 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g19847 CML23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37155 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16822 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015585001 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_09082 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_13868 CML43 Probable calcium-binding protein CML43 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_15095 MSS3 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28443 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_10289213g0010 CML41 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_103558g0010 UNE14 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10431324g0020 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_13199g0010 CML42 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
MA_27386g0010 UNE14 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_393053g0010 CML41 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_7799814g0010 CML41 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_8749g0010 CML43 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp1g22210.1 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp5g22000.1 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp6g20440.1 CML42 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Mp6g20470.1 UNE14 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Msp_g43018 UNE14 calcium sensor *(CML) & original description: none 0.12 OrthoFinder output from all 47 species
Pnu_g21574 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27455 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16755 UNE14 calcium sensor *(CML) & original description: none 0.17 OrthoFinder output from all 47 species
Smo233632 UNE14 Calmodulin-like protein 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc09g055880.1.1 AGD11, Solyc09g055880 Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g49928 UNE14 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49929 UNE14 calcium sensor *(CML) & original description: none 0.15 OrthoFinder output from all 47 species
Tin_g45724 CML43 calcium sensor *(CML) & original description: none 0.14 OrthoFinder output from all 47 species
Zm00001e001557_P001 CML42, Zm00001e001557 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e038252_P001 CML43, Zm00001e038252 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 274 333
IPR002048 EF_hand_dom 177 240
No external refs found!