Nbi_g28791 (AtGH9C3, GH9C3)


Aliases : AtGH9C3, GH9C3

Description : class-C endo-1,4-beta-glucanase & original description: none


Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g28791

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00144060 GH9C2, AtGH9C2,... Endoglucanase 6 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00165730 CEL1, GH9B1,... Endoglucanase 8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00234390 AtGH9A4, GH9A4,... Endoglucanase 16 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00027p00247670 GH9B18,... Endoglucanase 23 OS=Oryza sativa subsp. japonica 0.05 OrthoFinder output from all 47 species
AMTR_s00099p00070580 CEL5, ATGH9B4,... Endoglucanase 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00224p00022980 AtGH9B7, GH9B7,... Endoglucanase 10 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00224p00023160 AtGH9B5, GH9B5,... Endoglucanase 24 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT1G22880 CEL5, ATGH9B4, ATCEL5 cellulase 5 0.03 OrthoFinder output from all 47 species
AT1G48930 AtGH9C1, GH9C1 glycosyl hydrolase 9C1 0.03 OrthoFinder output from all 47 species
AT1G64390 GH9C2, AtGH9C2 glycosyl hydrolase 9C2 0.02 OrthoFinder output from all 47 species
AT2G32990 AtGH9B8, GH9B8 glycosyl hydrolase 9B8 0.04 OrthoFinder output from all 47 species
AT4G23560 GH9B15, AtGH9B15 glycosyl hydrolase 9B15 0.02 OrthoFinder output from all 47 species
AT4G39000 GH9B17, AtGH9B17 glycosyl hydrolase 9B17 0.02 OrthoFinder output from all 47 species
Adi_g056031 AtGH9B7, GH9B7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12848 AtGH9B7, GH9B7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27809 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00949 AtGH9B5, GH9B5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10239 GH9C2, AtGH9C2 class-C endo-1,4-beta-glucanase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70443 AtGH9A4, GH9A4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene69642.t1 GH9B14,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0383.g067439 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g10899 AtGH9A4, GH9A4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g44695 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51055 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01526 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09747 GH9C2, AtGH9C2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12625 AtGH9B7, GH9B7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31034 ATCEL2, CEL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012043001 AtGH9C1, GH9C1 Endoglucanase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019420001 GH9B14, AtGH9B14 Endoglucanase OS=Phaseolus vulgaris 0.05 OrthoFinder output from all 47 species
GSVIVT01032798001 GH9B10, AtGH9B10 Endoglucanase 13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01037210001 CEL5, ATGH9B4, ATCEL5 Cell wall.cellulose.degradation.endo-1,4-beta-glucanase 0.05 OrthoFinder output from all 47 species
GSVIVT01037709001 AtGH9B8, GH9B8 Endoglucanase 11 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os04g36610.1 ATGH9B3, CEL3,... endo-1,4-beta-glucanase 0.02 OrthoFinder output from all 47 species
Len_g09471 AtGH9A4, GH9A4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56121 GH9C2, AtGH9C2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g19490 AtGH9B7, GH9B7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10241783g0010 AtGH9C1, GH9C1 Endoglucanase 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_107238g0010 AtGH9B13, GH9B13 Endoglucanase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_127108g0010 AtGH9C3, GH9C3 Endoglucanase 19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_140507g0010 CEL1, GH9B1, ATGH9B1 Endoglucanase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_20530g0010 AtGH9C3, GH9C3 Endoglucanase 19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_501421g0010 AtGH9B13, GH9B13 Endoglucanase 17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g43445 AtGH9B8, GH9B8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07537 AtGH9B5, GH9B5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63529 GH9C2, AtGH9C2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019803 AtGH9A4, GH9A4 not classified & original description: CDS=1-363 0.04 OrthoFinder output from all 47 species
Smo234652 GH9C2, AtGH9C2 Endoglucanase 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo77612 AtGH9B5, GH9B5 Endoglucanase 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g083820.3.1 CEL1, GH9B1,... Endoglucanase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc11g040340.3.1 CEL5, ATGH9B4,... endo-1,4-beta-glucanase 0.02 OrthoFinder output from all 47 species
Spa_g50102 AtGH9B8, GH9B8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g50788 AtGH9A4, GH9A4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07062 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013509_P001 ATCEL2, CEL2,... Endoglucanase 4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e015765_P001 AtGH9B8, GH9B8,... Endoglucanase 7 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e023503_P001 AtGH9B8, GH9B8,... Endoglucanase 7 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 34 496
IPR019028 CBM_49 601 681
No external refs found!