Aliases : AtcpRRF, HFP108, cpRRF, RRF
Description : translation ribosome recycling factor *(RRF) & original description: none
Gene families : OG0006870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006870_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00103p00070570 | AtcpRRF, HFP108,... | Protein biosynthesis.organelle translation... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G63190 | AtcpRRF, HFP108,... | ribosome recycling factor, chloroplast precursor | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g21988 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g21989 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g02938 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g23021 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g05774 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.25G011000.1 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021489.22 | AtcpRRF, HFP108,... | Protein biosynthesis.organelle translation... | 0.01 | OrthoFinder output from all 47 species | |
| Cre03.g156050 | AtcpRRF, HFP108,... | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03594 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g00377 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.12 | OrthoFinder output from all 47 species | |
| GSVIVT01001148001 | AtcpRRF, HFP108,... | Protein biosynthesis.organelle translation... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g38300.1 | AtcpRRF, HFP108,... | RRF translation ribosome recycling factor | 0.07 | OrthoFinder output from all 47 species | |
| Len_g47851 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g05872 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Mp5g14000.1 | AtcpRRF, HFP108,... | RRF translation ribosome recycling factor | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g11460 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g04942 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g17819 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g48097 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10744 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006320 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15107 | No alias | translation ribosome recycling factor *(RRF) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc09g065270.3.1 | AtcpRRF, HFP108,... | RRF translation ribosome recycling factor | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g44127 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Tin_g00796 | AtcpRRF, HFP108,... | translation ribosome recycling factor *(RRF) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e021862_P002 | AtcpRRF, HFP108,... | RRF translation ribosome recycling factor | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e029168_P003 | AtcpRRF, HFP108,... | RRF translation ribosome recycling factor | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | HCCA |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0098809 | nitrite reductase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023584 | Ribosome_recyc_fac_dom | 208 | 370 |
| No external refs found! |
