Nbi_g29119


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29119

Target Alias Description ECC score Gene Family Method Actions
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G57430 OTP84 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g008519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014778 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g026401 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g053713 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075673 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101344 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g03700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g34624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36220 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23933 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28684 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30802 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene66061.t1 Aspi01Gene66061 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012359 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Azfi_s0544.g076393 No alias not classified & original description: CDS=1-927 0.06 OrthoFinder output from all 47 species
Azfi_s2932.g113765 CRR22 not classified & original description: CDS=1-1710 0.06 OrthoFinder output from all 47 species
Cba_g15366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20724 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.01G107500.1 Ceric.01G107500 not classified & original description: pacid=50592273... 0.04 OrthoFinder output from all 47 species
Ceric.02G042700.1 Ceric.02G042700 not classified & original description: pacid=50584264... 0.04 OrthoFinder output from all 47 species
Ceric.02G054700.1 Ceric.02G054700 not classified & original description: pacid=50584211... 0.03 OrthoFinder output from all 47 species
Ceric.09G069300.1 OTP86, Ceric.09G069300 not classified & original description: pacid=50588354... 0.09 OrthoFinder output from all 47 species
Ceric.1Z131300.1 CRR22, Ceric.1Z131300 not classified & original description: pacid=50639026... 0.04 OrthoFinder output from all 47 species
Ceric.34G047900.1 Ceric.34G047900 not classified & original description: pacid=50622720... 0.06 OrthoFinder output from all 47 species
Dac_g15068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18832 No alias ssDNA-binding protein *(OSB) & original description: none 0.11 OrthoFinder output from all 47 species
Dac_g19126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g31026 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33196 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g37952 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003650001 OTP80 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01017996001 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
GSVIVT01023971001 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
GSVIVT01033863001 No alias RNA processing.organelle machineries.RNA... 0.05 OrthoFinder output from all 47 species
Gb_04990 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_05554 OTP84 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_11926 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_18745 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Gb_25130 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.03 OrthoFinder output from all 47 species
Gb_28390 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_31374 EMB2261 Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Gb_33210 OTP84 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_37517 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_38680 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os01g19380.1 LOC_Os01g19380 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
LOC_Os12g01850.1 LOC_Os12g01850 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36620.1 LOC_Os12g36620 Pentatricopeptide repeat-containing protein At4g13650... 0.11 OrthoFinder output from all 47 species
Len_g05215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33479 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g33765 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34147 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11799 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08826 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g28794 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06293 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07674 CRR22 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g08417 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g39306 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g05130 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12909 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16142 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05340 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06848 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06858 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09360 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59327 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g63206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03885 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g12231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo118039 OTP82 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Smo172234 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species
Smo74842 OTP86 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Smo76226 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Solyc01g095690.2.1 Solyc01g095690 Pentatricopeptide repeat-containing protein At4g01030,... 0.03 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
Solyc04g064750.2.1 Solyc04g064750 RNA editing factor (MEF12). serine carboxypeptidase 0.03 OrthoFinder output from all 47 species
Solyc11g006700.1.1 Solyc11g006700 Pentatricopeptide repeat-containing protein At5g04780,... 0.02 OrthoFinder output from all 47 species
Spa_g14604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15000 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g19054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05621 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g21929 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26638 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30245 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35267 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g39811 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g43909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 133 179
IPR002885 Pentatricopeptide_repeat 234 281
IPR002885 Pentatricopeptide_repeat 311 335
No external refs found!