Nbi_g29271


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29271

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00093260 SLO1,... Pentatricopeptide repeat-containing protein At2g22410,... 0.03 OrthoFinder output from all 47 species
AT3G24000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g010601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098198 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29136 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21667 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36206 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36537 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26507 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g01397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02588 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02900 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09002 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12052 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16779 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16784 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17269 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18332 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19645 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20814 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g22269 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23668 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23672 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g23676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23948 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23950 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26165 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28719 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g29767 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g31176 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g32926 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33358 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g35712 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g59647 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67886 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68105 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0082.g038719 No alias not classified & original description: CDS=1-2307 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048736 No alias not classified & original description: CDS=1-3153 0.03 OrthoFinder output from all 47 species
Cba_g11093 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G067800.1 Ceric.07G067800 not classified & original description: pacid=50627089... 0.04 OrthoFinder output from all 47 species
Ceric.12G018600.1 Ceric.12G018600 not classified & original description: pacid=50602205... 0.04 OrthoFinder output from all 47 species
Ceric.12G097500.1 Ceric.12G097500 not classified & original description: pacid=50601961... 0.04 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.04 OrthoFinder output from all 47 species
Ceric.23G013400.1 Ceric.23G013400 not classified & original description: pacid=50609831... 0.04 OrthoFinder output from all 47 species
Ceric.26G046300.1 Ceric.26G046300 not classified & original description: pacid=50599602... 0.04 OrthoFinder output from all 47 species
Ceric.28G027200.1 DOT4, Ceric.28G027200 not classified & original description: pacid=50570918... 0.05 OrthoFinder output from all 47 species
Ceric.28G057800.1 REME1, Ceric.28G057800 not classified & original description: pacid=50570331... 0.05 OrthoFinder output from all 47 species
Ceric.29G082000.1 Ceric.29G082000 not classified & original description: pacid=50625862... 0.04 OrthoFinder output from all 47 species
Ceric.37G004200.1 Ceric.37G004200 not classified & original description: pacid=50616137... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g02864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03825 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12450 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12693 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18760 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21951 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42980 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08500 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02296 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09173 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16405 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03855 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g01336 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17695 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44401 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g37511 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13575 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39076 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g44278 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53593 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56752 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61878 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008151 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026000 No alias not classified & original description: CDS=66-1799 0.03 OrthoFinder output from all 47 species
Sam_g10509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27497 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g08057 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10971 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g12114 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g19938 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20291 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g21394 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g27671 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g31189 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46182 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51387 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g52133 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g52644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55805 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22109 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 112 130
IPR002885 Pentatricopeptide_repeat 76 105
IPR002885 Pentatricopeptide_repeat 136 184
IPR002885 Pentatricopeptide_repeat 238 285
No external refs found!