Nbi_g29286 (ATWBC11, ABCG11, DSO,...)

Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g29286

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s01903p00008330	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
AMTR_s03052p00000290	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Aev_g05451	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g39654	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g02213	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g04587	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g04588	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g08566	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g26274	ATWBC11, ABCG11,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g57136	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene10683.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene20147.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene20192.t1	Aspi01Gene20192	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene36347.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene37216.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene47189.t1	ATWBC11, ABCG11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49654.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene53383.t2	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene56079.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene63590.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g010438	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=344-2638	0.03	OrthoFinder output from all 47 species
Azfi_s0012.g012801	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=1-2178	0.05	OrthoFinder output from all 47 species
Azfi_s0013.g013442	ATWBC11, ABCG11,...	not classified & original description: CDS=1-1776	0.02	OrthoFinder output from all 47 species
Azfi_s0038.g026266	ATWBC11, ABCG11,...	not classified & original description: CDS=1-1830	0.01	OrthoFinder output from all 47 species
Azfi_s0051.g031409	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=1-2238	0.04	OrthoFinder output from all 47 species
Azfi_s0123.g048394	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=209-2359	0.06	OrthoFinder output from all 47 species
Azfi_s0296.g063538	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=746-2245	0.01	OrthoFinder output from all 47 species
Cba_g19304	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.05G037000.1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.05G037200.1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g06946	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g19107	ATWBC11, ABCG11,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g22783	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g15022	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g11431	ATWBC11, ABCG11,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g42494	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Gb_16311	No alias	ABC transporter G family member 3 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Gb_21283	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Gb_33538	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
LOC_Os09g03939.1	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
LOC_Os09g29660.1	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
LOC_Os10g35180.1	ATWBC11, ABCG11,...	suberin/cutin lipid exporter (DSO). subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Len_g05431	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Len_g13334	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g08640	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g34849	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g37886	ATWBC11, ABCG11,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g14599	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g15583	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g64589	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g45722	ATWBC11, ABCG11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004343	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=978-3230	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018713	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=276-2255	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021852	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=1-1884	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s1312.g027986	ATWBC11, ABCG11,...	not classified & original description: CDS=352-2547	0.01	OrthoFinder output from all 47 species
Sam_g24075	No alias	subfamily ABCG transporter & original description: none	0.08	OrthoFinder output from all 47 species
Sam_g34684	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g48301	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo171321	ATWBC11, ABCG11,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Smo171782	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo231246	ATWBC11, ABCG11,...	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
Tin_g21787	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	403	615
IPR003439	ABC_transporter-like_ATP-bd	93	244

External Links

No external refs found!

Nbi_g29286 (ATWBC11, ABCG11, DSO,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation