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  5. Nbi_g29299

Nbi_g29299 (GLP5)


Aliases : GLP5

Description : not classified & original description: none


Gene families : OG0000033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29299
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00231430 ATGER3, GLP3B,... Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G02335 GL22 germin-like protein subfamily 2 member 2 precursor 0.02 OrthoFinder output from all 47 species
AT1G18970 GLP4 germin-like protein 4 0.03 OrthoFinder output from all 47 species
Adi_g084940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087539 GLP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25850 GLP10 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27492 GLP7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67253 GLP10 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g69912 ATGER1, GER1, GLP1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene47742.t1 GLP10, Aspi01Gene47742 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47746.t1 GLP10, Aspi01Gene47746 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0228.g059066 No alias not classified & original description: CDS=1-711 0.03 OrthoFinder output from all 47 species
Ceric.02G081800.1 GLP5, Ceric.02G081800 not classified & original description: pacid=50585521... 0.04 OrthoFinder output from all 47 species
Ceric.03G079700.1 GL22, Ceric.03G079700 not classified & original description: pacid=50572173... 0.06 OrthoFinder output from all 47 species
Ceric.08G010800.1 GL22, Ceric.08G010800 not classified & original description: pacid=50637603... 0.06 OrthoFinder output from all 47 species
Ceric.12G008500.1 GLP10, Ceric.12G008500 not classified & original description: pacid=50600741... 0.02 OrthoFinder output from all 47 species
Ceric.1Z074900.1 GLP10, Ceric.1Z074900 not classified & original description: pacid=50634955... 0.03 OrthoFinder output from all 47 species
Ceric.20G091100.1 GLP10, Ceric.20G091100 not classified & original description: pacid=50566034... 0.03 OrthoFinder output from all 47 species
Ceric.24G045300.1 GLP10, Ceric.24G045300 not classified & original description: pacid=50629640... 0.05 OrthoFinder output from all 47 species
Ceric.39G015100.1 GLP5, Ceric.39G015100 not classified & original description: pacid=50582926... 0.03 OrthoFinder output from all 47 species
GSVIVT01000097001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01000098001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01000101001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01016761001 ATGER3, GLP3B,... Auxin-binding protein ABP19a OS=Prunus persica 0.03 OrthoFinder output from all 47 species
GSVIVT01031080001 No alias Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031082001 GER2, ATGER2, GLP2A Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_10684 GLP10 Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_17046 ATGER3, GLP3B,... Auxin-binding protein ABP19a OS=Prunus persica... 0.03 OrthoFinder output from all 47 species
LOC_Os08g08960.1 LOC_Os08g08960 Germin-like protein 8-2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39510.1 GLP5, LOC_Os09g39510 Germin-like protein 9-1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39520.1 GL22, LOC_Os09g39520 Putative germin-like protein 9-2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39530.1 GL22, LOC_Os09g39530 Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g09344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54264 GLP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56248 GLP10 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g57824 GLP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58626 GLP10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_29729g0010 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_43266g0010 GLP7 Germin-like protein 8-4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_465263g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7898849g0010 GL22 Germin-like protein subfamily 2 member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_8404570g0010 ATGER3, GLP3B,... Germin-like protein subfamily 3 member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_926447g0010 ATGER3, GLP3B,... Germin-like protein 8-14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp5g00860.1 GLP5 Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp5g13870.1 GLP4 Germin-like protein 5-1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp5g16550.1 GLP4 Germin-like protein 3-6 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Msp_g44695 GL22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g16368 GLP10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17761 GLP10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c23_1420V3.1 GLP5, Pp3c23_1420 germin-like protein 5 0.01 OrthoFinder output from all 47 species
Pp3c23_1430V3.1 GLP5, Pp3c23_1430 germin-like protein 5 0.01 OrthoFinder output from all 47 species
Solyc01g102895.1.1 GER2, ATGER2,... Germin-like protein subfamily 1 member 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g00455 GLP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017425_P001 GLP5, Zm00001e017425 Germin-like protein 1-1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 120 246
No external refs found!