Nbi_g29548 (CRR2)


Aliases : CRR2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29548

Target Alias Description ECC score Gene Family Method Actions
AT1G77150 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g033617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g044762 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075673 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48164 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14919 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G070800.1 Ceric.29G070800 not classified & original description: pacid=50625555... 0.02 OrthoFinder output from all 47 species
Dac_g30287 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23529 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54970 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57357 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07605 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53483 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17314 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004061 arylformamidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0004865 protein serine/threonine phosphatase inhibitor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010923 negative regulation of phosphatase activity IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019441 tryptophan catabolic process to kynurenine IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0035305 negative regulation of dephosphorylation IEP HCCA
BP GO:0035308 negative regulation of protein dephosphorylation IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045765 regulation of angiogenesis IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070189 kynurenine metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901342 regulation of vasculature development IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 201 248
IPR002885 Pentatricopeptide_repeat 301 348
IPR002885 Pentatricopeptide_repeat 102 128
No external refs found!