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  5. Nbi_g29590

Nbi_g29590


Description : not classified & original description: none


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g29590

Target Alias Description ECC score Gene Family Method Actions
AT2G41330 No alias Glutaredoxin family protein 0.04 OrthoFinder output from all 47 species
Adi_g002031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g007996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020923 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g11362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G013200.1 Ceric.04G013200 not classified & original description: pacid=50630697... 0.04 OrthoFinder output from all 47 species
Ceric.18G003000.1 Ceric.18G003000 not classified & original description: pacid=50622119... 0.03 OrthoFinder output from all 47 species
Ceric.38G044900.1 Ceric.38G044900 not classified & original description: pacid=50579532... 0.03 OrthoFinder output from all 47 species
Dac_g01599 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g14274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011378001 No alias Uncharacterized protein At3g28850 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g07470.1 LOC_Os03g07470 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g07886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09338 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001700_P001 Zm00001e001700 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e006789_P001 Zm00001e006789 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e023894_P001 Zm00001e023894 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e027223_P001 Zm00001e027223 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e036119_P001 Zm00001e036119 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 488 554
No external refs found!