Nbi_g30152


Description : not classified & original description: none


Gene families : OG0000318 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g30152

Target Alias Description ECC score Gene Family Method Actions
Adi_g003289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33166 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g57138 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g17142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G117900.1 Ceric.01G117900 not classified & original description: pacid=50591132... 0.04 OrthoFinder output from all 47 species
Len_g56122 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13443 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40782 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30182 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR026960 RVT-Znf 58 120
No external refs found!