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  5. Nbi_g30966

Nbi_g30966 (PLA IIB, PLP6)


Aliases : PLA IIB, PLP6

Description : phospholipase-A2 *(pPLA2-III)) & original description: none


Gene families : OG0000386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000386_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g30966
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00056890 AtPLAIVC, PLP4,... Lipid metabolism.lipid degradation.phospholipase... 0.03 OrthoFinder output from all 47 species
Als_g08894 AtPLAIVC, PLP4, PLA V phospholipase-A2 *(pPLA2-II)) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007450001 AtPLAIVC, PLP4, PLA V Lipid metabolism.lipid degradation.phospholipase... 0.03 OrthoFinder output from all 47 species
GSVIVT01007451001 PLA IIA, PLA2A, PLP2 Patatin-like protein 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01009531001 PLA IIA, PLA2A, PLP2 Lipid metabolism.lipid degradation.phospholipase... 0.02 OrthoFinder output from all 47 species
GSVIVT01009533001 PLA IIA, PLA2A, PLP2 Lipid metabolism.lipid degradation.phospholipase... 0.04 OrthoFinder output from all 47 species
GSVIVT01009537001 PLA IIA, PLA2A, PLP2 Lipid metabolism.lipid degradation.phospholipase... 0.02 OrthoFinder output from all 47 species
GSVIVT01009541001 PLA IIA, PLA2A, PLP2 Lipid metabolism.lipid degradation.phospholipase... 0.02 OrthoFinder output from all 47 species
GSVIVT01009543001 PLA IIA, PLA2A, PLP2 Lipid metabolism.lipid degradation.phospholipase... 0.02 OrthoFinder output from all 47 species
LOC_Os03g14950.1 PLA IIB, PLP6,... phospholipase A2 (pPLA2-III) 0.03 OrthoFinder output from all 47 species
LOC_Os03g43880.1 PLP7, PLA IIIA,... phospholipase A2 (pPLA2-III) 0.04 OrthoFinder output from all 47 species
LOC_Os03g57080.1 PLP7, PLA IIIA,... phospholipase A2 (pPLA2-III) 0.02 OrthoFinder output from all 47 species
LOC_Os08g37180.1 PLA IIA, PLA2A,... phospholipase A2 (pPLA2-II) 0.05 OrthoFinder output from all 47 species
LOC_Os11g40009.1 PLA IIA, PLA2A,... Patatin-like protein 1 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
LOC_Os12g36530.1 PLA IIA, PLA2A,... phospholipase A2 (pPLA2-II) 0.03 OrthoFinder output from all 47 species
Lfl_g16174 AtPLAIVB, PLA IVB, PLP5 phospholipase-A2 *(pPLA2-II)) & original description: none 0.03 OrthoFinder output from all 47 species
MA_14256g0010 PLP9, PLA IIIB no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_468579g0010 AtPLAIVC, PLP4, PLA V phospholipase A2 (pPLA2-II) 0.02 OrthoFinder output from all 47 species
MA_47191g0010 PLA IVA, PLP1, AtPLAIVA Patatin-like protein 2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_8049g0010 No alias phospholipase A2 (pPLA2-II) 0.03 OrthoFinder output from all 47 species
MA_84393g0010 PLA IVA, PLP1, AtPLAIVA phospholipase A2 (pPLA2-II) 0.02 OrthoFinder output from all 47 species
Mp1g21770.1 PLA IIB, PLP6 phospholipase A2 (pPLA2-III) 0.03 OrthoFinder output from all 47 species
Pir_g08069 PLA IVA, PLP1, AtPLAIVA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g090490.3.1 AtPLAIVC, PLP4,... phospholipase A2 (pPLA2-II) 0.02 OrthoFinder output from all 47 species
Solyc02g090630.4.1 PLA IIA, PLA2A,... phospholipase A2 (pPLA2-II) 0.03 OrthoFinder output from all 47 species
Zm00001e003817_P001 PLA IIA, PLA2A,... phospholipase A2 (pPLA2-II) 0.02 OrthoFinder output from all 47 species
Zm00001e003820_P001 PLA IIA, PLA2A,... phospholipase A2 (pPLA2-II) 0.02 OrthoFinder output from all 47 species
Zm00001e005038_P001 PLP7, PLA IIIA,... phospholipase A2 (pPLA2-III) 0.03 OrthoFinder output from all 47 species
Zm00001e005899_P001 PLP7, PLA IIIA,... phospholipase A2 (pPLA2-III) 0.02 OrthoFinder output from all 47 species
Zm00001e012413_P001 PLP7, PLA IIIA,... phospholipase A2 (pPLA2-III) 0.03 OrthoFinder output from all 47 species
Zm00001e018567_P002 PLA IIA, PLA2A,... Patatin-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 85 291
No external refs found!