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  5. Nbi_g31440

Nbi_g31440


Description : not classified & original description: none


Gene families : OG0000011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g31440

Target Alias Description ECC score Gene Family Method Actions
Adi_g012229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058569 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03670.t1 CRK8, Aspi01Gene03670 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05170.t1 ORF240B, Aspi01Gene05170 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08023.t1 ORF240B, Aspi01Gene08023 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15485.t1 CRK8, Aspi01Gene15485 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17140.t1 Aspi01Gene17140 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17759.t1 Aspi01Gene17759 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29304.t1 Aspi01Gene29304 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29782.t1 Aspi01Gene29782 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene36335.t1 ORF240B, Aspi01Gene36335 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene38707.t1 Aspi01Gene38707 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene41214.t1 Aspi01Gene41214 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene47474.t1 Aspi01Gene47474 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene47475.t1 Aspi01Gene47475 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene52650.t1 ORF240B, Aspi01Gene52650 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene62009.t1 CRK8, Aspi01Gene62009 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66342.t1 CRK8, Aspi01Gene66342 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72153.t1 Aspi01Gene72153 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72739.t1 CRK8, Aspi01Gene72739 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38300 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g00400.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g17526 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c11_9140V3.1 ORF240B, Pp3c11_9140 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Solyc08g150126.1.1 Solyc08g150126 Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Spa_g19653 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 373 473
IPR025724 GAG-pre-integrase_dom 292 358
IPR013103 RVT_2 710 755
No external refs found!