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  5. Nbi_g31776

Nbi_g31776


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g31776

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00156450 REME1,... Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Adi_g099160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g12662 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36521 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g23203 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene02319.t1 Aspi01Gene02319 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17591.t1 Aspi01Gene17591 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30842.t1 OTP84, Aspi01Gene30842 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G076500.1 Ceric.17G076500 not classified & original description: pacid=50617139... 0.05 OrthoFinder output from all 47 species
Ceric.18G077100.1 Ceric.18G077100 not classified & original description: pacid=50621411... 0.05 OrthoFinder output from all 47 species
Ceric.21G053500.1 Ceric.21G053500 not classified & original description: pacid=50604142... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_05982 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_06576 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
LOC_Os01g66160.1 REME1, LOC_Os01g66160 Pentatricopeptide repeat-containing protein At2g03880,... 0.05 OrthoFinder output from all 47 species
LOC_Os03g60690.1 LPA66, LOC_Os03g60690 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Len_g05419 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g08566 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03158 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g43985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15720 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g22160 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007796 No alias not classified & original description: CDS=1-2022 0.02 OrthoFinder output from all 47 species
Spa_g07289 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g16702 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g20187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005071_P002 OSB1, Zm00001e005071 ssDNA-binding protein (OSB) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 54 102
IPR002885 Pentatricopeptide_repeat 260 304
IPR002885 Pentatricopeptide_repeat 434 458
IPR002885 Pentatricopeptide_repeat 131 157
IPR002885 Pentatricopeptide_repeat 333 354
IPR002885 Pentatricopeptide_repeat 160 189
IPR002885 Pentatricopeptide_repeat 359 405
No external refs found!