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  5. Nbi_g32647

Nbi_g32647 (OTP84)


Aliases : OTP84

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g32647

Target Alias Description ECC score Gene Family Method Actions
Ala_g28362 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17754 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08450 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28536 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001288 No alias not classified & original description: CDS=1-3081 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004138 No alias not classified & original description: CDS=1-2646 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005870 No alias not classified & original description: CDS=1-2601 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007447 No alias not classified & original description: CDS=108-3026 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008203 OTP86 not classified & original description: CDS=1-2439 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024290 No alias not classified & original description: CDS=1-2301 0.04 OrthoFinder output from all 47 species
Tin_g35237 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 325 348
IPR002885 Pentatricopeptide_repeat 527 554
IPR032867 DYW_dom 669 760
IPR002885 Pentatricopeptide_repeat 146 193
IPR002885 Pentatricopeptide_repeat 350 398
IPR002885 Pentatricopeptide_repeat 453 500
IPR002885 Pentatricopeptide_repeat 248 295
IPR046848 E_motif 571 630
No external refs found!