Nbi_g33202

Description : not classified & original description: none

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g33202

Target	Alias	Description	ECC score	Gene Family Method
AT2G18193	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
AT3G28600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
AT4G25835	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
AT5G40000	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
Adi_g016569	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g054385	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077316	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g05390	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g07534	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g06267	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g13091	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g30408	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g32826	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene06431.t1	Aspi01Gene06431	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene72897.t1	Aspi01Gene72897	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.01G052300.1	Ceric.01G052300	not classified & original description: pacid=50592955...	0.05	OrthoFinder output from all 47 species
Dac_g34932	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g05212	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g17234	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g45785	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g16997	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01029545001	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01032558001	AATP1	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
LOC_Os01g42030.1	BCS1, LOC_Os01g42030	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os01g45450.1	LOC_Os01g45450	AAA-ATPase At5g17740 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os05g51130.1	BCS1, LOC_Os05g51130	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os07g09420.1	LOC_Os07g09420	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os12g28137.1	AATP1, LOC_Os12g28137	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g28177.1	AATP1, LOC_Os12g28177	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os12g28590.1	AATP1, LOC_Os12g28590	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Len_g15160	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g28817	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10426157g0010	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_296237g0020	BCS1	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
MA_5260g0010	AATP1	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_604139g0010	AATP1	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Mp7g18570.1	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Ore_g03711	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g033790.4.1	BCS1, Solyc03g033790	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Spa_g11504	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e003358_P001	AATP1, Zm00001e003358	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e006040_P001	AATP1, Zm00001e006040	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0042255	ribosome assembly	IEP	HCCA
BP	GO:0042256	cytosolic ribosome assembly	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	21	141
IPR003959	ATPase_AAA_core	264	412

External Links

No external refs found!

Nbi_g33202

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation