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Nbi_g34784 (ATSS3, SS3)


Aliases : ATSS3, SS3

Description : starch synthase *(SS3) & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g34784
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Aev_g25563 ATSS4, SS4, SSIV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13690 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02948.t1 ATSS4, SS4,... starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43821.t1 ATSS4, SS4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G125000.1 ATSS4, SS4,... starch synthase *(SS4) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.18G020900.1 ATSS3, SS3,... starch synthase *(SS3) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g19480 ATSS4, SS4, SSIV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43983 ATSS3, SS3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04240 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24346 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02313 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.07 OrthoFinder output from all 47 species
Pp3c9_14980V3.1 ATSS4, SS4,... starch synthase 4 0.03 OrthoFinder output from all 47 species
Ppi_g07616 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26732 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 898 1089
IPR005085 CBM25 800 887
IPR005085 CBM25 464 542
IPR005085 CBM25 638 724
No external refs found!