Aliases : CAB3, AB180, LHCB1.2
Description : component *(LHCb1/2/3) of LHC-II complex & original description: none
Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00069900 | LHCB1.5, LHB1B2,... | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G29910 | CAB3, AB180, LHCB1.2 | chlorophyll A/B binding protein 3 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G29920 | CAB2, AB165, LHCB1.1 | chlorophyll A/B-binding protein 2 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G29930 | LHCB1.3, CAB140,... | chlorophyll A/B binding protein 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G05070 | LHCB2.2, LHCB2 | photosystem II light harvesting complex gene 2.2 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G05100 | LHCB2.1, LHCB2 | photosystem II light harvesting complex gene 2.1 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G34420 | LHCB1.5, LHB1B2 | photosystem II light harvesting complex gene B1B2 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G54270 | LHCB3*1, LHCB3 | light-harvesting chlorophyll B-binding protein 3 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g023263 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06137 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13806 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04751 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g12306 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g17843 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12114 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g14660 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21318 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28499 | CAB3, AB180, LHCB1.2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g69021 | CAB3, AB180, LHCB1.2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04468 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G016900.1 | LHCB5, Ceric.07G016900 | component *(LHCb5) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G082300.1 | LHCB1.5, LHB1B2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G082500.1 | LHCB1.4, LHB1B1,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G083100.1 | LHCB1.5, LHB1B2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G001900.1 | LHCB3*1, LHCB3,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G039300.1 | LHCB1.5, LHB1B2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cre01.g066917 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g548400 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g00552 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14033 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g29163 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g29164 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g29165 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g32133 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g31946 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g18848 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g41770 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g48076 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g09693 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g12327 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26492 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014439001 | LHCB3*1, LHCB3 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23732 | LHCB1.5, LHB1B2 | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g41710.1 | LHCB1.5, LHB1B2,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g39610.1 | LHCB2.2, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g37550.1 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g17740.1 | LHCB1.5, LHB1B2,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g13890.1 | LHCB5, LOC_Os11g13890 | component LHCb5 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09838 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17713 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g23888 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g56584 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g29620.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g06720.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g06760.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g06770.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g06780.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g08940.1 | LHCB3*1, LHCB3 | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g09180.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g05193 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g07998 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g07999 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11796 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g26835 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28747 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g30962 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g15308 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g21027 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32299 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35944 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g41462 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g10162 | CAB3, AB180, LHCB1.2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19122 | CAB3, AB180, LHCB1.2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c2_36190V3.1 | LHCB2.3, LHCB2,... | photosystem II light harvesting complex gene 2.1 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c2_36500V3.1 | LHCB2.3, LHCB2,... | photosystem II light harvesting complex gene 2.1 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c5_7150V3.1 | LHCB2.3, LHCB2,... | photosystem II light harvesting complex gene 2.1 | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g42183 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003924 | LHCB5 | component *(LHCb5) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g08056 | No alias | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g070940.1.1 | LHCB1.3, CAB140,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g070950.1.1 | LHCB1.3, CAB140,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g071010.1.1 | LHCB1.3, CAB140,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g005760.1.1 | LHCB1.3, CAB140,... | component LHCb1/2/3 of LHC-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g005770.3.1 | LHCB1.3, CAB140,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g063370.3.1 | LHCB5, Solyc06g063370 | component LHCb5 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g047850.3.1 | LHCB2.3, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g063600.3.1 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g067320.3.1 | LHCB1.5, LHB1B2,... | Chlorophyll a-b binding protein 3A, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g067330.1.1 | CAB3, AB180,... | Chlorophyll a-b binding protein 16, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g011450.2.1 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g02789 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29645 | LHCB3*1, LHCB3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04406 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g08938 | LHCB5 | component *(LHCb5) of LHC-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12536 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g32122 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g39699 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g41925 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e004940_P001 | LHCB2.3, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004941_P001 | LHCB2.3, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011045_P002 | LHCB5, Zm00001e011045 | component LHCb5 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e020627_P001 | LHCB1.5, LHB1B2,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021290_P001 | LHCB5, Zm00001e021290 | component LHCb5 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032450_P001 | LHCB1.5, LHB1B2,... | Chlorophyll a-b binding protein, chloroplastic OS=Zea... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034922_P001 | LHCB1.5, LHB1B2,... | Chlorophyll a-b binding protein 1, chloroplastic OS=Zea... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e035249_P001 | LHCB3*1, LHCB3,... | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 1 | 126 |
| No external refs found! |
