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  5. Nbi_g36268

Nbi_g36268 (PBP1)


Aliases : PBP1

Description : not classified & original description: none


Gene families : OG0001109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g36268

Target Alias Description ECC score Gene Family Method Actions
AT4G27280 No alias Calcium-binding EF-hand family protein 0.04 OrthoFinder output from all 47 species
AT5G54490 PBP1 pinoid-binding protein 1 0.04 OrthoFinder output from all 47 species
Aev_g09810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g15929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22275 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G000200.1 Ceric.24G000200 not classified & original description: pacid=50629224... 0.04 OrthoFinder output from all 47 species
Ceric.24G000300.1 Ceric.24G000300 not classified & original description: pacid=50628799... 0.03 OrthoFinder output from all 47 species
Ceric.30G075700.1 PBP1, Ceric.30G075700 not classified & original description: pacid=50608449... 0.03 OrthoFinder output from all 47 species
Ceric.30G075800.1 PBP1, Ceric.30G075800 not classified & original description: pacid=50608432... 0.03 OrthoFinder output from all 47 species
Ceric.30G075900.1 PBP1, Ceric.30G075900 not classified & original description: pacid=50609408... 0.03 OrthoFinder output from all 47 species
Dde_g13120 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g18729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_17267 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g01599 PBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_25900g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_48747g0010 No alias Calcium-binding protein KIC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_7489059g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g09603 PBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g053050.1.1 Solyc07g053050 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g006660.3.1 Solyc10g006660 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g006700.1.1 Solyc10g006700 Calcium-binding protein KRP1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 85 134
No external refs found!