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  5. Nbi_g36424

Nbi_g36424


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g36424

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00192080 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00062800 evm_27.TU.AmTr_v1... Chitinase 2 OS=Tulipa bakeri 0.04 OrthoFinder output from all 47 species
Adi_g049053 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g049054 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051500 No alias 2S globulin seed storage protein & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g082491 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03907 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Als_g51900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14065.t1 Aspi01Gene14065 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene55008.t1 Aspi01Gene55008 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55009.t1 Aspi01Gene55009 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68850.t1 Aspi01Gene68850 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59888 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G066400.1 Ceric.14G066400 2S globulin seed storage protein & original description:... 0.09 OrthoFinder output from all 47 species
Ceric.1Z210800.1 Ceric.1Z210800 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g28835 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47659 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14449 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05578 No alias no description available(sp|q7m443|chit2_tulsb : 320.0) 0.05 OrthoFinder output from all 47 species
LOC_Os01g57390.1 LOC_Os01g57390 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g57400.1 LOC_Os01g57400 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g28050.1 LOC_Os10g28050 no description available(sp|q7m443|chit2_tulsb : 285.0) 0.04 OrthoFinder output from all 47 species
Lfl_g24818 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15826 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30589 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03759 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13030 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61907 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Smo411181 No alias Chitinase 1 OS=Tulipa bakeri 0.02 OrthoFinder output from all 47 species
Spa_g41882 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18192 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004770_P001 Zm00001e004770 no description available(sp|q7m443|chit2_tulsb : 315.0) 0.03 OrthoFinder output from all 47 species
Zm00001e021310_P001 Zm00001e021310 no description available(sp|q7m443|chit2_tulsb : 281.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0051118 glucan endo-1,3-alpha-glucosidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 44 188
No external refs found!