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  5. Nbi_g36854

Nbi_g36854 (UBQ11)


Aliases : UBQ11

Description : not classified & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g36854

Target Alias Description ECC score Gene Family Method Actions
AT2G36170 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.02 OrthoFinder output from all 47 species
AT2G47110 UBQ6 ubiquitin 6 0.02 OrthoFinder output from all 47 species
AT3G52590 UBQ1, EMB2167,... ubiquitin extension protein 1 0.02 OrthoFinder output from all 47 species
AT3G62250 UBQ5 ubiquitin 5 0.02 OrthoFinder output from all 47 species
Als_g38574 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G035500.1 Ceric.08G035500 component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre06.g273600 UBQ6 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g48344 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033876001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01038617001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os09g39500.1 LOC_Os09g39500 component RPL40 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Msp_g27896 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Pir_g35714 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c10_25270V3.1 Pp3c10_25270 ubiquitin extension protein 1 0.02 OrthoFinder output from all 47 species
Pp3c12_5640V3.1 UBQ6, Pp3c12_5640 ubiquitin 6 0.01 OrthoFinder output from all 47 species
Pp3c12_5760V3.1 UBQ6, Pp3c12_5760 ubiquitin 6 0.03 OrthoFinder output from all 47 species
Pp3c20_23170V3.1 Pp3c20_23170 ubiquitin extension protein 1 0.02 OrthoFinder output from all 47 species
Pp3c24_430V3.1 Pp3c24_430 ubiquitin extension protein 1 0.02 OrthoFinder output from all 47 species
Pp3c4_19000V3.1 UBQ6, Pp3c4_19000 ubiquitin 6 0.02 OrthoFinder output from all 47 species
Pp3c8_14230V3.1 UBQ6, Pp3c8_14230 ubiquitin 6 0.02 OrthoFinder output from all 47 species
Ppi_g41403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo111605 UBQ6 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Solyc08g083120.3.1 Solyc08g083120 component RPL40 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Solyc12g099025.1.1 UBQ6, Solyc12g099025 component RPS27a of SSU proteome 0.04 OrthoFinder output from all 47 species
Spa_g29603 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
MF GO:0005179 hormone activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 7 78
No external refs found!