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  5. Nbi_g36884

Nbi_g36884


Description : subgroup ERF-III transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g36884
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00066390 RAP2.11,... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
AMTR_s00107p00095070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.02 OrthoFinder output from all 47 species
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.03 OrthoFinder output from all 47 species
Aop_g00507 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02788 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g61209 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00525.t1 Aspi01Gene00525 subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11852.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene24330.t1 Aspi01Gene24330 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24408.t1 DEAR2, Aspi01Gene24408 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29234.t1 Rap2.6L, Aspi01Gene29234 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43376.t1 DREB26, Aspi01Gene43376 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene43377.t1 DREB26, Aspi01Gene43377 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene52705.t1 DREB26, Aspi01Gene52705 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56620.t1 RAP2.9, DEAR5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56622.t1 RAP2.9, DEAR5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58616.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene67784.t1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035884 No alias subgroup ERF-V transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0263.g060857 LEP subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g13066 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G043500.1 HRE2, Ceric.15G043500 transcription factor component *(HRE/RAP2.12) of... 0.06 OrthoFinder output from all 47 species
Ceric.30G071700.1 HRE2, Ceric.30G071700 not classified & original description: pacid=50607972... 0.02 OrthoFinder output from all 47 species
Dac_g21287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31512 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37778 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33863 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g50775 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028315001 ERF1, ATERF1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66270.1 LOC_Os01g66270 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g10760.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
LOC_Os02g35240.1 LOC_Os02g35240 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g42585.1 LOC_Os02g42585 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g52670.1 ERF110, LOC_Os02g52670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08460.1 RAP2.12, LOC_Os03g08460 Ethylene-responsive transcription factor ERF073... 0.02 OrthoFinder output from all 47 species
LOC_Os03g08470.1 RAP2.12, LOC_Os03g08470 Ethylene-responsive transcription factor 1 OS=Oryza... 0.03 OrthoFinder output from all 47 species
LOC_Os03g22170.1 HRE2, LOC_Os03g22170 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g44670.1 LOC_Os04g44670 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g56150.1 LOC_Os04g56150 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g09717.1 LOC_Os06g09717 Ethylene-responsive transcription factor ERF018... 0.05 OrthoFinder output from all 47 species
LOC_Os06g11940.1 LOC_Os06g11940 Ethylene-responsive transcription factor ERF017... 0.04 OrthoFinder output from all 47 species
LOC_Os06g36000.1 TINY2, LOC_Os06g36000 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os08g35240.1 LOC_Os08g35240 Ethylene-responsive transcription factor ERF017... 0.04 OrthoFinder output from all 47 species
LOC_Os09g13940.2 LOC_Os09g13940 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os10g25170.1 RAP2.2, LOC_Os10g25170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g41330.1 ERF-6-6, ERF6,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os11g06770.2 ERF110, LOC_Os11g06770 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Len_g12891 ERF2, ATERF2, ATERF-2 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30898 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
MA_10020434g0010 No alias Ethylene-responsive transcription factor ERF013... 0.03 OrthoFinder output from all 47 species
MA_12671g0020 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_15496g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.03 OrthoFinder output from all 47 species
MA_54341g0010 WIN1, SHN1 transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
MA_66742g0010 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_8384767g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Mp4g17430.1 RAP2.6 Ethylene-responsive transcription factor ERF112... 0.02 OrthoFinder output from all 47 species
Mp5g22160.1 ERF110 Ethylene-responsive transcription factor ERF112... 0.02 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp7g17020.1 No alias Dehydration-responsive element-binding protein 2C... 0.02 OrthoFinder output from all 47 species
Msp_g07523 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g43178 RAP2.9, DEAR5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26878 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26909 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30771 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38654 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06183 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g37199 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g12670 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Pnu_g20605 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_23930V3.1 ERF-1, ATERF-1,... ethylene responsive element binding factor 1 0.01 OrthoFinder output from all 47 species
Pp3c5_820V3.1 Pp3c5_820 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g00885 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013094 No alias subgroup ERF-V transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016650 ERF38, ATERF38 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sam_g25988 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.06 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.05 OrthoFinder output from all 47 species
Solyc01g009440.3.1 CBF4, DREB1D,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc01g065980.4.1 ERF72, EBP,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc02g093130.3.1 DEAR3, Solyc02g093130 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc03g006320.1.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g114440.1.1 RAP2.11, Solyc03g114440 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Solyc04g071770.3.1 ERF110, Solyc04g071770 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g072300.1.1 Solyc04g072300 Ethylene-responsive transcription factor FZP OS=Oryza... 0.02 OrthoFinder output from all 47 species
Solyc04g080910.1.1 Solyc04g080910 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g078170.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g078410.2.1 Solyc08g078410 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g39178 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51648 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52172 TINY2 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Zm00001e000400_P001 Zm00001e000400 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e000611_P001 HRE1, Zm00001e000611 Ethylene-responsive transcription factor ERF073... 0.03 OrthoFinder output from all 47 species
Zm00001e023159_P001 Zm00001e023159 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0020037 heme binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 45 95
No external refs found!