Nbi_g36945 (ABCG40, PDR12,...)

Aliases : ABCG40, PDR12, ATABCG40, ATPDR12

Description : not classified & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g36945
Cluster	HCCA: Cluster_247

Target	Alias	Description	ECC score	Gene Family Method
Als_g38651	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene02114.t2	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene69802.t1	ATPDR3, PDR3,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.03G077000.1	PEN3, ABCG36,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
LOC_Os02g11760.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
LOC_Os06g36090.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Tin_g09989	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	3	164

External Links

No external refs found!