Aliases : PUB23
Description : not classified & original description: none
Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Nbi_g37574 | |
| Cluster | HCCA: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00030p00130440 | CMPG2, ATCMPG2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00043p00215340 | PUB8, B80,... | U-box domain-containing protein 8 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT2G35930 | PUB23 | plant U-box 23 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G02840 | No alias | ARM repeat superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G11840 | PUB24 | plant U-box 24 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G19380 | PUB25 | plant U-box 25 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g003285 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g014414 | PUB25 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g05258 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g15461 | CMPG2, ATCMPG2 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02187 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g05204 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20026 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g23185 | CMPG1, ATCMPG1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g23643 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g61569 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62359 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04412 | PUB23 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene18444.t1 | PUB23, Aspi01Gene18444 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene25347.t1 | PUB26, Aspi01Gene25347 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene27391.t1 | PUB26, Aspi01Gene27391 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene44314.t1 | PUB23, Aspi01Gene44314 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44315.t1 | PUB23, Aspi01Gene44315 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44316.t1 | PUB23, Aspi01Gene44316 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44317.t1 | PUB23, Aspi01Gene44317 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44318.t1 | PUB23, Aspi01Gene44318 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44321.t1 | PUB23, Aspi01Gene44321 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene55033.t1 | PUB25, Aspi01Gene55033 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g38190 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G007700.1 | PUB23, Ceric.10G007700 | not classified & original description: pacid=50612519... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.1Z056500.1 | PUB26, Ceric.1Z056500 | U-Box-group-III E3 ubiquitin ligase & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g01592 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07515 | PUB25 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g01521 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07421 | PUB23 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g11246 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g26825 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03660 | PUB23 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g11323 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011616001 | CMPG1, ATCMPG1 | U-box domain-containing protein 20 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_02628 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_02635 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_29851 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g33680.1 | CMPG2, ATCMPG2,... | U-box domain-containing protein 29 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g13740.1 | LOC_Os03g13740 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g34140.1 | PUB29, ATPUB29,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g58920.1 | PUB23, LOC_Os04g58920 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g13870.1 | LOC_Os06g13870 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g06410.1 | PUB24, LOC_Os12g06410 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16219 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g31416 | PUB23 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g24284 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10430196g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432813g0010 | PUB22 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_126399g0010 | PUB26 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_58844g0020 | PUB22 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_684442g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_779502g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_8030489g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_8837995g0010 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Mp2g06090.1 | PUB25 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g22750.1 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11599 | PUB23 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g35056 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g38744 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g21647 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29544 | PUB23 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36530 | PUB23 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12470 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0148.g023196 | PUB26 | not classified & original description: CDS=1-1080 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g007010.2.1 | PUB22, Solyc01g007010 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007020.4.1 | PUB23, Solyc01g007020 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007030.3.1 | PUB22, Solyc01g007030 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007040.4.1 | PUB22, Solyc01g007040 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g107980.3.1 | PUB26, Solyc01g107980 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g008100.3.1 | Solyc04g008100 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc04g071030.1.1 | Solyc04g071030 | E3 ubiquitin ligase (PUB) | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g00706 | PUB23 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g47017 | PUB23 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e014752_P001 | PUB23, Zm00001e014752 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e014766_P001 | CMPG2, ATCMPG2,... | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015763_P001 | Zm00001e015763 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e019173_P001 | PUB23, Zm00001e019173 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e036030_P001 | Zm00001e036030 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e039417_P001 | PUB23, Zm00001e039417 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
No InterPro domains available for this sequence
| No external refs found! |
