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  5. Nbi_g38275

Nbi_g38275


Description : not classified & original description: none


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g38275
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00151440 SLP2,... Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00910p00007910 ATSBT5.4,... Subtilisin-like protease SBT5.4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G04110 SDD1 Subtilase family protein 0.02 OrthoFinder output from all 47 species
Adi_g023054 ARA12 protease *(SBT1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00164.t1 Aspi01Gene00164 protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62296.t1 Aspi01Gene62296 protease *(SBT1) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37007 ARA12 protease *(SBT1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003689001 No alias Subtilisin-like protease SBT2.6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01009371001 ARA12 Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_20397 ATSBT5.2 CO(2)-response secreted protease OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_39302 SLP3 protease (SBT2) 0.03 OrthoFinder output from all 47 species
LOC_Os01g58290.1 ATSBT3.5,... Subtilisin-like protease SBT3.5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g03810.1 LOC_Os04g03810 Subtilisin-like protease SBT3.3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g47150.1 LOC_Os04g47150 Subtilisin-like protease SBT1.8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48650.2 LOC_Os06g48650 protease (SBT2) 0.02 OrthoFinder output from all 47 species
Len_g49210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435307g0010 No alias Subtilisin-like protease SBT3.6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g37438 No alias protease *(SBT4) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18723 No alias protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63155 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008961 No alias not classified & original description: CDS=320-2542 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011345 SDD1 not classified & original description: CDS=15-353 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022696 No alias not classified & original description: CDS=1-753 0.08 OrthoFinder output from all 47 species
Smo172478 ATSBT5.4, SBT5.4 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
Smo416154 No alias Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc02g092670.1.1 ARA12, Solyc02g092670 protease (SBT1) 0.04 OrthoFinder output from all 47 species
Solyc06g083720.2.1 SDD1, Solyc06g083720 protease (SBT1) 0.03 OrthoFinder output from all 47 species
Solyc07g056170.4.1 AIR3, Solyc07g056170 protease (SBT5) 0.03 OrthoFinder output from all 47 species
Spa_g31228 SLP3 protease *(SBT2) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49560 ARA12 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e004661_P001 Zm00001e004661 Subtilisin-like protease SBT2.6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e034797_P001 Zm00001e034797 protease (SBT3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR010259 S8pro/Inhibitor_I9 24 73
No external refs found!