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  5. Nbi_g38534

Nbi_g38534


Description : solute transporter *(UmamiT) & original description: none


Gene families : OG0000138 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g38534

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00110850 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.02 OrthoFinder output from all 47 species
AMTR_s00103p00127060 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species
AT1G09380 No alias nodulin MtN21 /EamA-like transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G18200 No alias nodulin MtN21 /EamA-like transporter family protein 0.03 OrthoFinder output from all 47 species
AT4G28040 No alias nodulin MtN21 /EamA-like transporter family protein 0.02 OrthoFinder output from all 47 species
Aev_g37453 WAT1 solute transporter *(UmamiT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15289 WAT1 solute transporter *(UmamiT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50201 WAT1 solute transporter *(UmamiT) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G015500.1 WAT1, Ceric.36G015500 solute transporter *(UmamiT) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01009805001 WAT1 Solute transport.carrier-mediated transport.DMT... 0.02 OrthoFinder output from all 47 species
GSVIVT01016598001 No alias Solute transport.carrier-mediated transport.DMT... 0.03 OrthoFinder output from all 47 species
Gb_01918 No alias solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
Gb_01919 No alias solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
Gb_05699 No alias solute transporter (UmamiT) 0.04 OrthoFinder output from all 47 species
Gb_23832 No alias solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
Gb_35355 No alias solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
LOC_Os01g02870.1 LOC_Os01g02870 solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
LOC_Os02g02310.1 WAT1, LOC_Os02g02310 solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
LOC_Os06g01966.1 LOC_Os06g01966 solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
MA_115880g0010 WAT1 solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
MA_14668g0010 No alias solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
MA_66556g0010 No alias solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
Mp6g20720.1 No alias solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
Pir_g60605 WAT1 solute transporter *(UmamiT) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g25787 WAT1 solute transporter *(UmamiT) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g100900.4.1 Solyc01g100900 solute transporter (UmamiT) 0.01 OrthoFinder output from all 47 species
Solyc01g104750.4.1 Solyc01g104750 solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
Solyc03g005480.4.1 Solyc03g005480 solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
Solyc03g118900.3.1 Solyc03g118900 solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
Solyc04g080940.4.1 WAT1, Solyc04g080940 solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
Solyc11g005350.2.1 Solyc11g005350 solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
Spa_g29483 No alias solute transporter *(UmamiT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28189 No alias solute transporter *(UmamiT) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e025380_P001 WAT1, Zm00001e025380 solute transporter (UmamiT) 0.03 OrthoFinder output from all 47 species
Zm00001e030202_P003 Zm00001e030202 solute transporter (UmamiT) 0.02 OrthoFinder output from all 47 species
Zm00001e037973_P002 Zm00001e037973 solute transporter (UmamiT) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004126 cytidine deaminase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
BP GO:0006213 pyrimidine nucleoside metabolic process IEP HCCA
BP GO:0006216 cytidine catabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009164 nucleoside catabolic process IEP HCCA
BP GO:0009972 cytidine deamination IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP HCCA
BP GO:0042454 ribonucleoside catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046087 cytidine metabolic process IEP HCCA
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP HCCA
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP HCCA
BP GO:0046135 pyrimidine nucleoside catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072529 pyrimidine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000620 EamA_dom 9 134
IPR000620 EamA_dom 192 275
No external refs found!