Nbi_g38540


Description : not classified & original description: none


Gene families : OG0003115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003115_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g38540

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00225690 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G01800 No alias saposin B domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g126931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g105200 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre05.g235700 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os12g02094.1 LOC_Os12g02094 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008528 No alias not classified & original description: CDS=233-1303 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR008138 SapB_2 410 443
IPR008138 SapB_2 329 360
IPR007856 SapB_1 288 324
IPR007856 SapB_1 371 406
No external refs found!