Nbi_g38619


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g38619

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00256920 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Adi_g004508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g07974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16762 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g30051 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g36534 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g06784 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26537 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30417 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g47255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54594 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g59835 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g26509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26680 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g30975 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g35556 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g43783 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g61293 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70076 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70213 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g21447 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os03g55840.1 LOC_Os03g55840 Pentatricopeptide repeat-containing protein DWY1,... 0.06 OrthoFinder output from all 47 species
Len_g04365 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g05419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g11858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26507 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43456 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Msp_g17020 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g38614 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g24060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16142 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16487 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55655 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g025700.2.1 Solyc03g025700 OTP70 plastidial RNA splicing factor 0.04 OrthoFinder output from all 47 species
Solyc03g111210.4.1 Solyc03g111210 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Solyc06g009500.1.1 Solyc06g009500 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc07g065730.1.1 Solyc07g065730 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Solyc09g082170.4.1 Solyc09g082170 Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Solyc09g082450.1.1 Solyc09g082450 RNA editing factor (YS1) 0.02 OrthoFinder output from all 47 species
Solyc12g006575.1.1 OTP82, Solyc12g006575 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Spa_g24095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.05 OrthoFinder output from all 47 species
Zm00001e032679_P001 Zm00001e032679 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 98 122
IPR002885 Pentatricopeptide_repeat 225 266
IPR002885 Pentatricopeptide_repeat 123 170
No external refs found!