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  5. Nbi_g38720

Nbi_g38720


Description : not classified & original description: none


Gene families : OG0000483 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000483_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g38720
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Als_g05035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45937.t1 Aspi01Gene45937 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71788.t1 Aspi01Gene71788 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G098300.1 Ceric.03G098300 not classified & original description: pacid=50571816... 0.03 OrthoFinder output from all 47 species
Dde_g49829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g06940.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g30720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40652 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g40654 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022661 No alias not classified & original description: CDS=1-1599 0.03 OrthoFinder output from all 47 species
Smo402885 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g13766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 59 151
IPR002110 Ankyrin_rpt 204 257
No external refs found!