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  5. Nbi_g38813

Nbi_g38813


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g38813

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00199190 No alias Pentatricopeptide repeat-containing protein At4g15720... 0.03 OrthoFinder output from all 47 species
AT2G36980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09904 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16516 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28404 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30975 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.07 OrthoFinder output from all 47 species
Ceric.14G094700.1 EMB2758, Ceric.14G094700 not classified & original description: pacid=50634278... 0.05 OrthoFinder output from all 47 species
Ceric.15G051800.1 VAC1, ECB2,... not classified & original description: pacid=50639747... 0.06 OrthoFinder output from all 47 species
Ceric.18G001000.1 Ceric.18G001000 not classified & original description: pacid=50621627... 0.07 OrthoFinder output from all 47 species
Ceric.28G015100.1 Ceric.28G015100 not classified & original description: pacid=50570923... 0.07 OrthoFinder output from all 47 species
Ceric.29G078100.1 Ceric.29G078100 not classified & original description: pacid=50625063... 0.04 OrthoFinder output from all 47 species
Ceric.34G070200.1 Ceric.34G070200 not classified & original description: pacid=50624170... 0.04 OrthoFinder output from all 47 species
Ceric.39G053500.1 Ceric.39G053500 not classified & original description: pacid=50582600... 0.07 OrthoFinder output from all 47 species
Dac_g13278 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35587 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06259 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g37952 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.02 OrthoFinder output from all 47 species
Len_g05447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g48142 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10434740g0010 OSB1 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Msp_g26082 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45693 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46091 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24651 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g27428 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g45369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027978_P001 MEF1, Zm00001e027978 RNA editing factor (MEF1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 821 867
IPR002885 Pentatricopeptide_repeat 520 563
IPR002885 Pentatricopeptide_repeat 315 355
IPR002885 Pentatricopeptide_repeat 617 666
IPR002885 Pentatricopeptide_repeat 719 766
IPR002885 Pentatricopeptide_repeat 112 160
IPR002885 Pentatricopeptide_repeat 289 314
IPR002885 Pentatricopeptide_repeat 694 717
IPR002885 Pentatricopeptide_repeat 418 448
IPR002885 Pentatricopeptide_repeat 795 816
IPR002885 Pentatricopeptide_repeat 188 214
IPR002885 Pentatricopeptide_repeat 492 512
IPR002885 Pentatricopeptide_repeat 389 413
No external refs found!