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  5. Nbi_g39094

Nbi_g39094


Description : not classified & original description: none


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g39094
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00151900 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT1G21326 No alias VQ motif-containing protein 0.01 OrthoFinder output from all 47 species
AT1G68450 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
AT3G18690 MKS1 MAP kinase substrate 1 0.01 OrthoFinder output from all 47 species
Adi_g045081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23545 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01180.t1 Aspi01Gene01180 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g29938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G042800.1 Ceric.29G042800 not classified & original description: pacid=50624678... 0.02 OrthoFinder output from all 47 species
Dac_g39274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g31553 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001661001 No alias No description available 0.14 OrthoFinder output from all 47 species
Gb_08522 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37589 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g22264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_136956g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
MA_27183g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_838428g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g19744 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g25952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g00521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016057 No alias not classified & original description: CDS=1-810 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s2220.g028295 No alias not classified & original description: CDS=1-810 0.01 OrthoFinder output from all 47 species
Sam_g12354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g060470.1.1 MKS1, Solyc06g060470 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g38545 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Spa_g41638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037399_P001 MKS1, Zm00001e037399 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 72 92
No external refs found!