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  5. Nbi_g39199

Nbi_g39199


Description : not classified & original description: none


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g39199
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00250830 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00163410 PDCB5,... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00110p00143620 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G18650 PDCB3 plasmodesmata callose-binding protein 3 0.03 OrthoFinder output from all 47 species
AT1G78520 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G03505 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G30933 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g18859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31221 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17170.t1 Aspi01Gene17170 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046176 No alias not classified & original description: CDS=153-617 0.03 OrthoFinder output from all 47 species
Azfi_s0259.g060656 No alias not classified & original description: CDS=357-1106 0.03 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05481 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G019400.1 Ceric.03G019400 not classified & original description: pacid=50572611... 0.03 OrthoFinder output from all 47 species
Ceric.05G008700.1 Ceric.05G008700 not classified & original description: pacid=50577231... 0.04 OrthoFinder output from all 47 species
Ceric.16G030300.1 Ceric.16G030300 not classified & original description: pacid=50589646... 0.03 OrthoFinder output from all 47 species
Ceric.27G013100.1 Ceric.27G013100 not classified & original description: pacid=50605460... 0.05 OrthoFinder output from all 47 species
Dac_g04433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07234 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g08788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16407 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21791 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g37072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37975 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g28755 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g14140.1 LOC_Os01g14140 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g14015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_939354g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Msp_g24416 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g29067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007451 No alias not classified & original description: CDS=31-672 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012023 No alias not classified & original description: CDS=866-1510 0.02 OrthoFinder output from all 47 species
Sam_g06584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g31368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g058080.3.1 Solyc04g058080 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc05g012380.3.1 PDCB4, Solyc05g012380 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g056310.3.1 Solyc07g056310 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc09g091920.3.1 Solyc09g091920 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc12g098410.2.1 Solyc12g098410 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g06484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29752 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g50712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14416 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Zm00001e016347_P001 Zm00001e016347 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.02 OrthoFinder output from all 47 species
Zm00001e035487_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 106 181
No external refs found!