Nbi_g39606


Description : not classified & original description: none


Gene families : OG0007862 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007862_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g39606

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00129550 evm_27.TU.AmTr_v1... Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Aev_g02215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11403 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.32G001900.1 Ceric.32G001900 not classified & original description: pacid=50598721... 0.05 OrthoFinder output from all 47 species
Dde_g11518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028479001 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os04g42800.1 LOC_Os04g42800 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_10430747g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g15330.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Pir_g19021 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc09g063140.4.1 Solyc09g063140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 123 199
No external refs found!