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  5. Nbi_g39681

Nbi_g39681 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g39681

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.03 OrthoFinder output from all 47 species
Ala_g16609 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19054 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G046500.1 Ceric.39G046500 not classified & original description: pacid=50582543... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.200 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g25062 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07430 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15529 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10317671g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_3462g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Nbi_g05835 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03178 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 426 473
IPR002885 Pentatricopeptide_repeat 123 168
IPR002885 Pentatricopeptide_repeat 224 270
IPR002885 Pentatricopeptide_repeat 325 371
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 198 220
IPR002885 Pentatricopeptide_repeat 299 323
IPR002885 Pentatricopeptide_repeat 531 555
IPR002885 Pentatricopeptide_repeat 400 425
No external refs found!