Nbi_g40750 (ATCSLD3, KJK, CSLD3)

Aliases : ATCSLD3, KJK, CSLD3

Description : mannan synthase *(CSLD) & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g40750
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
AT1G55850	ATCSLE1, CSLE1	cellulose synthase like E1	0.03	OrthoFinder output from all 47 species
AT2G32530	ATCSLB03, CSLB03, ATCSLB3	cellulose synthase-like B3	0.03	OrthoFinder output from all 47 species
AT2G32620	ATCSLB02, ATCSLB2, CSLB02	cellulose synthase-like B	0.02	OrthoFinder output from all 47 species
AT4G15290	ATCSLB05, CSLB05, ATCSLB5	Cellulose synthase family protein	0.03	OrthoFinder output from all 47 species
Als_g40118	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aob_g23590	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aob_g30203	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Cba_g04692	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ceric.30G072100.1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g10159	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dac_g14092	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dac_g21512	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Dcu_g37271	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Dde_g48668	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g06173	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ehy_g06186	CESA09, CESA9	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
GSVIVT01030458001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
LOC_Os09g30120.1	ATCSLE1, CSLE1,...	Cellulose synthase-like protein E1 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
LOC_Os10g42750.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.04	OrthoFinder output from all 47 species
Mp2g07690.1	ATH-A, CESA2, ATCESA2	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Nbi_g27743	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g09621	MUR10, ATCESA7,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ore_g36488	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Ore_g37613	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c9_3670V3.1	Pp3c9_3670	cellulose synthase-like D3	0.01	OrthoFinder output from all 47 species
Solyc07g065660.4.1	ATCSLE1, CSLE1,...	Cellulose synthase-like protein E1 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Spa_g38470	ATCSLD3, KJK, CSLD3	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Spa_g40617	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e002486_P001	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Zm00001e004630_P001	CESA4, NWS2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e019828_P001	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	1	451

External Links

No external refs found!

Nbi_g40750 (ATCSLD3, KJK, CSLD3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation