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  5. Nbi_g40758

Nbi_g40758 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g40758
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Adi_g073485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26540 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g04075 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G067300.1 Ceric.07G067300 not classified & original description: pacid=50625994... 0.05 OrthoFinder output from all 47 species
Ceric.09G027000.1 Ceric.09G027000 not classified & original description: pacid=50586634... 0.05 OrthoFinder output from all 47 species
Ceric.10G012900.1 CRR22, Ceric.10G012900 not classified & original description: pacid=50612392... 0.04 OrthoFinder output from all 47 species
Dac_g16108 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30402 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23085 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g17858 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g36024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g062820.1.1 Solyc07g062820 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 50 73
IPR002885 Pentatricopeptide_repeat 152 174
IPR002885 Pentatricopeptide_repeat 458 479
IPR002885 Pentatricopeptide_repeat 254 276
IPR002885 Pentatricopeptide_repeat 280 326
IPR002885 Pentatricopeptide_repeat 76 122
IPR002885 Pentatricopeptide_repeat 484 530
IPR002885 Pentatricopeptide_repeat 381 428
IPR002885 Pentatricopeptide_repeat 178 224
No external refs found!