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  5. Nbi_g41847

Nbi_g41847 (NTMC2T1.3, SYT3,...)


Aliases : NTMC2T1.3, SYT3, NTMC2TYPE1.3, ATSYTC, SYTC

Description : not classified & original description: none


Gene families : OG0001021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g41847
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Ala_g05198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g34426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g47887 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g28011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g44632 NTMC2T1.2, SYTB,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g63844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25942 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35217 SYT5, NTMC2T2.1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g47781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37592 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g38978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41092 SYT5, NTMC2T2.1,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g44347 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g24305 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31792 SYT5, NTMC2T2.1,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g33485 NTMC2T1.3, SYT3,... not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g37182 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37909 SYT5, NTMC2T2.1,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g35018 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40734 SYT5, NTMC2T2.1,... not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 4 92
No external refs found!