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  5. Nbi_g42567

Nbi_g42567


Description : not classified & original description: none


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g42567
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
ATMG00860 ORF158 DNA/RNA polymerases superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g003387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g41776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42114 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g57168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17279 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene20865.t1 Aspi01Gene20865 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene58148.t1 Aspi01Gene58148 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63878.t1 Aspi01Gene63878 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69214.t1 ORF107E, Aspi01Gene69214 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g20027 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64009 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g062826.1.1 ORF158, Solyc12g062826 Uncharacterized mitochondrial protein AtMg00860... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041577 RT_RNaseH_2 278 366
IPR000477 RT_dom 57 217
No external refs found!