Nbi_g43016

Description : calcium sensor *(CML) & original description: none

Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g43016

Target	Alias	Description	ECC score	Gene Family Method
Ceric.01G015900.1	CAM3, acam-3,...	calcium sensor *(CML) & original description:...	0.03	OrthoFinder output from all 47 species
Smo181303	ACAM-6, CAM6	Calmodulin OS=Lilium longiflorum	0.03	OrthoFinder output from all 47 species
Spa_g47924	ACAM-4, CAM4	calcium sensor *(CML) & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	193	254
IPR002048	EF_hand_dom	115	176

External Links

No external refs found!