Aliases : LHCA5
Description : linker protein *(LHCa5) between PS-I complex and NDH complex & original description: none
Gene families : OG0000742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000742_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G19150 | LHCA2*1, LHCA6 | photosystem I light harvesting complex gene 6 | 0.04 | OrthoFinder output from all 47 species | |
| AT1G45474 | LHCA5 | photosystem I light harvesting complex gene 5 | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g00950 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g00983 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05433 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07082 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g33642 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g01741 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.37G034400.1 | LHCA5, Ceric.37G034400 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g02371 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009498001 | LHCA5 | Photosynthesis.photophosphorylation.photosystem I.LHC-I... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g33820.1 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12016 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16001 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g003955 | LHCA5 | linker protein *(LHCa5) between PS-I complex and NDH... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013113 | CAB4, LHCA4 | component *(LHCa4) of LHC-I complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0065.g016013 | LHCA2 | component *(LHCa2) of LHC-I complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Smo403333 | LHCA5 | Photosystem I chlorophyll a/b-binding protein 5,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g022900.4.1 | LHCA5, Solyc07g022900 | component LHCa5 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g006230.3.1 | LHCA2, Solyc10g006230 | component LHCa2 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04946 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g29531 | LHCA2 | component *(LHCa2) of LHC-I complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e004129_P001 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022453_P001 | CAB4, LHCA4,... | component LHCa4 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035349_P002 | LHCA2, Zm00001e035349 | component LHCa2 of LHC-I complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 74 | 242 |
| No external refs found! |
