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  5. Len_g01308

Len_g01308 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : not classified & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g01308

Target Alias Description ECC score Gene Family Method Actions
Ceric.18G020900.1 ATSS3, SS3,... starch synthase *(SS3) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g01991 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_31910 ATSS3, SS3 starch synthase (SSIII) 0.03 OrthoFinder output from all 47 species
Mp2g20000.1 ATSS3, SS3 starch synthase (SSIII) 0.02 OrthoFinder output from all 47 species
Pir_g02313 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 115 344
IPR001296 Glyco_trans_1 421 553
No external refs found!