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  5. Len_g01351

Len_g01351 (RPT3, NPH3, JK218)


Aliases : RPT3, NPH3, JK218

Description : substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex & original description: none


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g01351
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00174950 NPY2,... No description available 0.04 OrthoFinder output from all 47 species
AT2G14820 NPY2 Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
AT5G10250 DOT3 Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.04 OrthoFinder output from all 47 species
Ala_g18908 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g05273 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g19940 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aop_g07082 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23539.t1 Aspi01Gene23539 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene41127.t1 Aspi01Gene41127 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g15372 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.34G006100.1 Ceric.34G006100 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dac_g16053 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Dac_g32917 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01035968001 MAB4, NPY1, ENP BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04489 No alias BTB/POZ domain-containing protein At1g67900... 0.05 OrthoFinder output from all 47 species
Gb_34273 RPT3, NPH3, JK218 component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Gb_41063 RPT3, NPH3, JK218 Root phototropism protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g35970.1 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Msp_g24094 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Nbi_g01322 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Nbi_g04882 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ppi_g03108 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc03g044090.4.1 NPY2, Solyc03g044090 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g013570.3.1 Solyc05g013570 BTB/POZ domain-containing protein At1g67900... 0.03 OrthoFinder output from all 47 species
Solyc10g049660.2.1 NPY2, Solyc10g049660 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e003063_P004 NPY2, Zm00001e003063 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e008748_P001 RPT3, NPH3,... Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Zm00001e014883_P001 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Zm00001e033674_P003 Zm00001e033674 BTB/POZ domain-containing protein At5g47800... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 232 528
IPR000210 BTB/POZ_dom 48 135
No external refs found!