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  5. Len_g02314

Len_g02314


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g02314
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00200350 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00188860 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00083440 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g054784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g074128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18512.t1 Aspi01Gene18512 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G054300.1 Ceric.24G054300 not classified & original description: pacid=50629415... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.27 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g01601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027891001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_33485 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g10917 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_141102g0010 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g00898 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g19973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014264 No alias not classified & original description: CDS=1-1203 0.02 OrthoFinder output from all 47 species
Sam_g37589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g005680.3.1 Solyc03g005680 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc09g090520.3.1 Solyc09g090520 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g014600.2.1 Solyc12g014600 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g07882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 110 168
IPR000504 RRM_dom 8 69
No external refs found!