Len_g02582


Description : not classified & original description: none


Gene families : OG0008222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008222_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g02582
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Adi_g002273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11861 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0008.g011475 No alias not classified & original description: CDS=1-573 0.05 OrthoFinder output from all 47 species
Cba_g39062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G020300.1 Ceric.34G020300 not classified & original description: pacid=50622640... 0.06 OrthoFinder output from all 47 species
Dac_g27296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06465 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01038189001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os09g34140.2 LOC_Os09g34140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g07262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16102 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10434413g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g08977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc12g019550.2.1 Solyc12g019550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034712_P001 Zm00001e034712 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!