Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: none
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Len_g03115 | |
| Cluster | HCCA: Cluster_107 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00165910 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12201 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14817.t1 | Aspi01Gene14817 | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene19777.t1 | Aspi01Gene19777 | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43421.t1 | Aspi01Gene43421 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024585 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-897 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.19G013000.1 | Ceric.19G013000 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.13 | OrthoFinder output from all 47 species | |
| Ceric.20G005100.1 | Ceric.20G005100 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.15 | OrthoFinder output from all 47 species | |
| Nbi_g12014 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.17 | OrthoFinder output from all 47 species | |
| Nbi_g13792 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.2 | OrthoFinder output from all 47 species | |
| Ore_g26552 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g41713 | RMA1, ATRMA1 | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62388 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Solyc01g109340.4.1 | Solyc01g109340 | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g10565 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.17 | OrthoFinder output from all 47 species | |
| Spa_g11747 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005778 | peroxisomal membrane | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016559 | peroxisome fission | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031903 | microbody membrane | IEP | HCCA |
| CC | GO:0042579 | microbody | IEP | HCCA |
| BP | GO:0048285 | organelle fission | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
