Len_g03215 (EXPB3, ATEXPB3,...)


Aliases : EXPB3, ATEXPB3, ATHEXP BETA 1.6

Description : not classified & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00266410 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-type expansin 0.02 OrthoFinder output from all 47 species
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.04 OrthoFinder output from all 47 species
AT1G62980 EXPA18, EXP18,... expansin A18 0.04 OrthoFinder output from all 47 species
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G15370 ATHEXP ALPHA... expansin 12 0.03 OrthoFinder output from all 47 species
AT3G45960 ATEXLA3, EXPL3,... expansin-like A3 0.02 OrthoFinder output from all 47 species
AT4G17030 ATHEXP BETA 3.1,... expansin-like B1 0.02 OrthoFinder output from all 47 species
AT4G38210 ATEXPA20,... expansin A20 0.03 OrthoFinder output from all 47 species
AT5G02260 EXP9, EXPA9,... expansin A9 0.02 OrthoFinder output from all 47 species
Aev_g14831 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21493 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22661 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37307 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16199 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20858 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g32738 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02221 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14978 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15347 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40485 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51474 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52203 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04935 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20979 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07935 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07936 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12260 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13184 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13450 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21879 ATEXPA10,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21880 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30155 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33546 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g35135 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35329 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g41940 ATEXP14, EXPA14,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g44449 ATEXPA10,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58865 ATHEXP BETA 1.4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03879.t1 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40354.t1 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40971.t1 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42895.t1 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52233.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66975.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008552 LPA66 alpha-class expansin & original description: CDS=75-848 0.03 OrthoFinder output from all 47 species
Azfi_s0112.g045819 No alias alpha-class expansin & original description: CDS=122-925 0.04 OrthoFinder output from all 47 species
Cba_g00646 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08546 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09346 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G000500.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.02G091400.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.05G087800.1 ATEXPA10,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.10G048600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G026000.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G012800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.17G039900.1 ATEXPA10,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.17G041200.1 EXP15, ATEXPA15,... not classified & original description: pacid=50618023... 0.03 OrthoFinder output from all 47 species
Ceric.17G042600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z063100.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G024500.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G046400.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G061800.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.37G054100.1 ATEXPA3, EXP3,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g13325 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43609 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14223 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16057 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033691001 ATEXPA4, ATEXP4,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
LOC_Os01g60770.1 LOC_Os01g60770 alpha-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os02g16809.1 ATEXPA11, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os03g01260.1 ATHEXP BETA 1.4,... Expansin-B8 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04020.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g06020.1 LOC_Os03g06020 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g06050.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g25990.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g31480.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g60720.1 LOC_Os03g60720 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os04g15840.1 LOC_Os04g15840 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os05g19600.1 LOC_Os05g19600 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os05g39990.1 LOC_Os05g39990 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g30330.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g39640.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g40700.1 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g20899 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43179 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Len_g59336 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25335 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
MA_100868g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g22700.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g22720.1 ATEXPA4, ATEXP4,... Expansin-A4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g22730.1 EXP9, EXPA9,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Mp1g22740.1 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g24230.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g24390.1 EXPA6, ATEXP6,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g26350.1 ATEXP14, EXPA14,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp2g18610.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp3g09750.1 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp3g09770.1 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp3g24470.1 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp4g06560.1 EXPA16, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp8g18860.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g01863 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44170 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06079 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08040 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08041 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07847 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20451 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20452 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20453 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25427 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27761 ATEXPA1, EXP1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27815 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27816 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34219 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40782 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43051 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g22080 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06771 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06874 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08538 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08562 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10345 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g30591 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39288 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61503 EXPB3, ATEXPB3,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019978 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=189-965 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019980 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=1-819 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022152 EXPB3, ATEXPB3,... not classified & original description: CDS=169-1023 0.04 OrthoFinder output from all 47 species
Smo143857 ATEXPA3, EXP3,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Smo179212 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Smo231226 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Smo236978 EXPA16, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Smo91129 EXP15, ATEXPA15,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Solyc03g115270.3.1 ATHEXP ALPHA ... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc04g081870.4.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc05g052250.3.1 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Solyc09g010860.4.1 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc10g084780.3.1 EXP9, EXPA9,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Solyc12g089380.2.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Spa_g03664 EXP15, ATEXPA15,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09301 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12972 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25562 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28880 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38497 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38499 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g48547 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54039 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03825 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05844 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06848 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08942 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13994 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14286 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g30407 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32125 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000036_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e002332_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e002335_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e004713_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Zm00001e004714_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e010388_P001 EXPA16, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e017334_P001 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e019433_P001 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e038997_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 225 305
IPR009009 RlpA-like_DPBB 129 211
No external refs found!