Aliases : TCP2
Description : TCP-type transcription factor & original description: none
Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00158020 | TCP4, MEE35,... | RNA biosynthesis.transcriptional activation.TCP... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00154p00072430 | TCP13, TFPD,... | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G53230 | TCP3 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 | 0.02 | OrthoFinder output from all 47 species | |
| AT1G68800 | TCP12, BRC2 | TCP domain protein 12 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G02150 | TCP13, TFPD, PTF1 | plastid transcription factor 1 | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07745 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g18903 | TCP3 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30415 | TCP2 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene02917.t2 | TCP3, Aspi01Gene02917 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene48962.t1 | TCP13, TFPD,... | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene64947.t1 | TCP3, Aspi01Gene64947 | TCP-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01014236001 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020666001 | TCP4, MEE35 | RNA biosynthesis.transcriptional activation.TCP... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g55750.1 | TCP5, LOC_Os01g55750 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g57190.1 | ATTCP24, TCP24,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| MA_101752g0020 | ATTCP24, TCP24 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_52440g0010 | TCP4, MEE35 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_547683g0010 | TCP2 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g19590.1 | TCP3 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g26727 | TCP13, TFPD, PTF1 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo89227 | TCP2 | RNA biosynthesis.transcriptional activation.TCP... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g115010.3.1 | TCP5, Solyc03g115010 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g006980.1.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g009900.3.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g069460.3.1 | TCP5, Solyc06g069460 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e011911_P001 | ATTCP24, TCP24,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019734_P001 | TCP5, Zm00001e019734 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032821_P001 | TCP2, Zm00001e032821 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 42 | 142 |
| No external refs found! |
