Len_g03351 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03351

Target Alias Description ECC score Gene Family Method Actions
Aev_g07716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16718 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g18876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g34115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37466 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07474 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11250 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16738 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38453 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67654 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012398 No alias not classified & original description: CDS=1-3681 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012490 No alias not classified & original description: CDS=1-2382 0.04 OrthoFinder output from all 47 species
Azfi_s0033.g025098 No alias not classified & original description: CDS=1-4389 0.04 OrthoFinder output from all 47 species
Azfi_s0050.g030992 No alias not classified & original description: CDS=1-2877 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g033972 OTP84 not classified & original description: CDS=1-2028 0.04 OrthoFinder output from all 47 species
Azfi_s0194.g057200 No alias not classified & original description: CDS=1-3033 0.03 OrthoFinder output from all 47 species
Azfi_s0282.g063034 No alias not classified & original description: CDS=389-4795 0.03 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G010800.1 Ceric.02G010800 not classified & original description: pacid=50584420... 0.04 OrthoFinder output from all 47 species
Ceric.02G033100.1 Ceric.02G033100 not classified & original description: pacid=50586102... 0.03 OrthoFinder output from all 47 species
Ceric.03G029700.1 Ceric.03G029700 not classified & original description: pacid=50572783... 0.08 OrthoFinder output from all 47 species
Ceric.04G097800.1 Ceric.04G097800 not classified & original description: pacid=50631082... 0.03 OrthoFinder output from all 47 species
Ceric.05G039500.1 Ceric.05G039500 not classified & original description: pacid=50577997... 0.04 OrthoFinder output from all 47 species
Ceric.07G028700.1 Ceric.07G028700 not classified & original description: pacid=50626039... 0.05 OrthoFinder output from all 47 species
Ceric.07G030200.1 Ceric.07G030200 not classified & original description: pacid=50627452... 0.04 OrthoFinder output from all 47 species
Ceric.07G035900.1 Ceric.07G035900 not classified & original description: pacid=50625961... 0.05 OrthoFinder output from all 47 species
Ceric.07G067800.1 Ceric.07G067800 not classified & original description: pacid=50627089... 0.04 OrthoFinder output from all 47 species
Ceric.07G068400.1 Ceric.07G068400 not classified & original description: pacid=50628071... 0.04 OrthoFinder output from all 47 species
Ceric.09G066700.1 Ceric.09G066700 not classified & original description: pacid=50588343... 0.03 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.04 OrthoFinder output from all 47 species
Ceric.14G027100.1 Ceric.14G027100 not classified & original description: pacid=50633502... 0.06 OrthoFinder output from all 47 species
Ceric.14G077900.1 Ceric.14G077900 not classified & original description: pacid=50634382... 0.04 OrthoFinder output from all 47 species
Ceric.17G035100.1 Ceric.17G035100 not classified & original description: pacid=50618094... 0.04 OrthoFinder output from all 47 species
Ceric.21G088100.1 Ceric.21G088100 not classified & original description: pacid=50603070... 0.06 OrthoFinder output from all 47 species
Ceric.22G073800.1 Ceric.22G073800 not classified & original description: pacid=50614043... 0.04 OrthoFinder output from all 47 species
Ceric.26G046300.1 Ceric.26G046300 not classified & original description: pacid=50599602... 0.05 OrthoFinder output from all 47 species
Ceric.27G064200.1 Ceric.27G064200 not classified & original description: pacid=50604994... 0.05 OrthoFinder output from all 47 species
Ceric.34G030900.1 Ceric.34G030900 not classified & original description: pacid=50623489... 0.04 OrthoFinder output from all 47 species
Ceric.35G030500.1 Ceric.35G030500 not classified & original description: pacid=50580789... 0.04 OrthoFinder output from all 47 species
Ceric.36G033700.1 Ceric.36G033700 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.38G032700.1 Ceric.38G032700 not classified & original description: pacid=50579462... 0.05 OrthoFinder output from all 47 species
Ceric.39G004000.1 EMB2758, Ceric.39G004000 not classified & original description: pacid=50582620... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g09346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18287 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18763 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25030 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g26033 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g31950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39493 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g44035 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28915 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20638 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g64370.1 LOC_Os03g64370 Pentatricopeptide repeat-containing protein At5g52850,... 0.03 OrthoFinder output from all 47 species
Len_g44860 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g53944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
MA_38687g0010 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species
Msp_g20156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28790 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g31562 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g38952 OTP81 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41520 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45774 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06203 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23761 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25337 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27847 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g32187 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38654 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15720 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56161 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g01551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06017 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g06686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07289 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14331 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g14979 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g16047 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16452 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g20031 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21674 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22000 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22980 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23609 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26362 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27883 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g28143 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g30841 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g33276 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33277 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39327 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39514 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g47084 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g47991 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g49488 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53370 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57153 DOT4 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 468 489
IPR002885 Pentatricopeptide_repeat 60 83
IPR002885 Pentatricopeptide_repeat 570 591
IPR002885 Pentatricopeptide_repeat 367 390
IPR002885 Pentatricopeptide_repeat 86 132
IPR002885 Pentatricopeptide_repeat 187 233
IPR002885 Pentatricopeptide_repeat 289 336
IPR002885 Pentatricopeptide_repeat 493 541
IPR002885 Pentatricopeptide_repeat 393 438
No external refs found!