Aliases : PUB26
Description : E3 ubiquitin ligase & original description: none
Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g003285 | PUB25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04774 | PUB25 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene15171.t1 | PUB29, ATPUB29,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G004600.1 | PUB26, Ceric.07G004600 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11691 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026764001 | PUB22 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037585001 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16219 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10430196g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432179g0010 | PUB22 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_126399g0010 | PUB26 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_311559g0010 | PUB22 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_33190g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_779502g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g34239 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06864 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0005.g002717 | PUB26 | not classified & original description: CDS=1-1404 | 0.03 | OrthoFinder output from all 47 species | |
| Smo172230 | No alias | U-box domain-containing protein 14 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g009330.1.1 | PUB22, Solyc01g009330 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
| MF | GO:0005262 | calcium channel activity | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0006816 | calcium ion transport | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
| MF | GO:0015085 | calcium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| BP | GO:0032954 | regulation of cytokinetic process | IEP | HCCA |
| BP | GO:0032955 | regulation of division septum assembly | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051301 | cell division | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0070588 | calcium ion transmembrane transport | IEP | HCCA |
| BP | GO:0097553 | calcium ion transmembrane import into cytosol | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098657 | import into cell | IEP | HCCA |
| BP | GO:0098659 | inorganic cation import across plasma membrane | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098703 | calcium ion import across plasma membrane | IEP | HCCA |
| BP | GO:0098739 | import across plasma membrane | IEP | HCCA |
| BP | GO:0099587 | inorganic ion import across plasma membrane | IEP | HCCA |
| BP | GO:1901891 | regulation of cell septum assembly | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003613 | Ubox_domain | 5 | 76 |
| No external refs found! |
